Search Details
| UAMH Number: | 11012 |
|---|---|
| Species Name: | Phialocephala subalpina |
| Type: | |
| Synonyms: | |
| Taxonomy: | FUNGI Ascomycota, Leotiomycetes, Helotiales, Mollisiaceae |
| Strain History: | Grünig, C.R. (6 70 1) -> UAMH |
| Substrate: | fine root of Picea abies (Norway spruce) | Location: | SWITZERLAND Bodmerenwald (GEO: 46.972,8.835) |
| Isolator: | C.R. Grünig |
| Isolation Date: | 2003-09-10 |
| Date Received: | 2009-03-30 |
| Characters: | MOLECULAR SYSTEMATICS dark septate endophyte (DSE) - // MOLECULAR SYSTEMATICS Form taxon cryptic species CSP6 - // MOLECULAR SYSTEMATICS Microsatellite markers for Phialocephala subalpina and P. fortinii - Queloz V, Duo A, Gruenig CR, Molecular Ecology Resources 8:1322-1325, 2008 // MOLECULAR SYSTEMATICS mitochondrial genome evolution in species within the Phialocephala fortinii complex - Duo A, Bruggmann R, Zoller S, Bernt M, Gruenig CR, BMC Genomics 13:166-182, 2012 // MOLECULAR SYSTEMATICS Population genetic analysis of Phialocephala fortinii sensu lato - Gruenig CR, Duo A, Sieber TN, Fung Gen Biol 43:410-421, 2006 // MOLECULAR SYSTEMATICS Population genetic analysis of the Phialocephala fortinii complex - // MOLECULAR SYSTEMATICS Species recognition within Phialocephala fortinii complex - Gruenig CR, Duo A, Sieber TN, Holdenrieder O, Mycologia 100:47-67, 2008 // MOLECULAR SYSTEMATICS Whole genome sequence available - |
| Compounds: | |
| Cross Reference: | |
| Collections: | Living Strains; Dried Herbarium Material |
| Pathogenic Potential: | Human: no | Animal: no | Plant: yes |
| Biosafety Risk Group: | RG1 (check the PHAC ePATHogen Risk Group Database for updates) |
| Regulatory Requirements: | Canadian requesters must provide PHAC Pathogen and Toxin License Number (see: https://www.canada.ca/en/public-health/services/laboratory-biosafety-biosecurity/licensing-program.html) prior to shipment. International requesters must provide all legally required importation documentation prior to shipment. Plant pathogenicity status may be verified by using the USDA Agricultural Research Service (ARS) Fungal Database |
| MycoBank ID: | 499671 |
| Sequences: | >UAMH11012_DQ274821_bTub ACATCTGCATGAGAACTCTCAAGCTCTCCAACCCCTCTTACGGAGATCTCAACCACTTGGTCTCTGCCGTCATGTCGGGTGTCACTACCTGTCTCCGTTTCCCGGGTCAACTCAACTCTGATCTCCGAAAGTTGGCCGTCAACATGGTTCCCTTCCCTCGTCTCCATTTCTTCATGGTTGGCTTCGCTCCTCTTACCAGCCGTGGTGCTCACTCTTTCCGTGCCGTCACGGTCCCAGAGTTGACCCAGCAAATGTATGACCCAAAGAACATGATGGCTGCCTCCGATTTCCGTAACGGTCGTTACCTGACCTGCTCTGCTATCTTGTAAGTCTTCATAGCTCAATTTTGATGCCGCATGCTAACTTCTTCCAGCCGTGGTAAGGTCTCCATGAAGGAGGTTGAGGACCAAATGCGCAATGTTCAGAACAAGAACTCCTCCTACTTCGTCGAGTGGATTCCCAACAACGTCCAAACCGCACTCTGCTCCATTCCACCACGTGGCCTCAAGATGTCTTCCACATTCGTCGGAAACTCAACCTCCATCCAAGAGCTCTTCAAGCGTGTTGGTGACCAGTTCACTGCC >UAMH11012_DQ274555_EF1a CTCGGTGGGGTAAAATCCTTCGCCTCGCACAACAAATTTTTGCGCCCGTGCCATCGTCACGACAACATCATGATTGATGCCCAACGCACATACCCTTTCACAACACCCATACTTTTGCATAACACACAATGTCTTCGATAACATTGCTGACCCTTTCGATAGGAAGCCGCCGAGTTGGGCAAGGGTTCTTTCAAGTACGCATGGGTTCTTGACAAGCTAAAGGCCGAGCGTGAGCGTGGTATCACCATCGATATCGCTCTCTGGAAGTTCGAGACCCCAAAGTACTATGTCACCGTCATTGGTATGTCTTCGCAGATGCGTCGCATCATCTTCCCTGCTAACACCTCGCAGATGCTCCCGGTCACCGTGATTTCATCAAGAACATGATCACTGGTACTTCCCAGGCCGATTGCGCTATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGCCAGACTCGTGAGCACGCCCTCCTCGCCTACACCCTTGGTGTCAAGCAACTCATCGTCGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCTCGTTACCAGGAAATC >UAMH11012_FJ418237_M1 CCTCCGCTATAGATGCAACAATTAGTGCTATTATCAGCAAGGCAGAGGCTGACGACGACGACGACGACGGGGAGAACAATGCCGAAAAGGCGGCCAAGGATGCAATGAAGGCCACTCAAACCAAAGCTACTCAGGATGGC >UAMH11012_FJ418266_M2 CCTAGAAGGGTGGTGGGTTTAACCTTCTTCTTCTTGGACCTCTTGCGCTTCTTTTTCTTTTCTGAAACAGTAGTGAGTAAAATGGTAGAAAGTTCGGTCAATATCAAAGAGATATTTATGTTTTGTCTTACCAGCATCGGGAGCAGAGGCACTTATGGCGGGAGTAGCTCCTTCCTTCTCATCGTCGTCATCATCGTCGTCGTCGTTGCTGACGATACCACGATC >UAMH11012_FJ418302_M3 CGAGATAGTCCGGGACAGAAGCTCTGCTTGCATGGCATAGCCATCCTGAATAGCTTTGGTTTGAGTGGCCTTCATTGCATCCTTGGCCGCCTTTTCGGCATTGTTCTCCCCGTCGTCGTCGTCGTCGTCAGCCTCTGCCTTGCTGATAATAGCACTAATTGTTGCATCTATAGCGG >UAMH11012_FJ418359_M4 CGGTTACGATGTCACTGCACACGGCCGCGGTTCGTGTGTGTGTGCGTGTGCGTGTGTGTGTGTGTGTTTGGTTTGTTCGCACGCTGAGTGAACCGAGGATC >UAMH11012_FJ418397_M5 GCTTTCACATCACCATCCAGAGAATTGACGAGAAAGTCACGGGGAGAGAGAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAAACAGACAGACAGAGAGAAATAGCAGAGAGAAAGAGAATCAAGTCGCAGCCAGCGGGCATGCTTGCAAGGTACGAAACTCGCAACCAACTCACC >UAMH11012_FJ418437_M6 GCTGTTGGACTCGGTTATGGATTTAATTGAATCATTCAAGGGCTTTCCCTGCATCCCAAGTGCTATTATTCCAAGTACCCATTTAATATATCCCGTTCAGCTTGCGAAGAATAGTGTATGCTGGCGCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGGAAGGTCGCTCCATGCGTTTCATACAAATGCCATACAATCTGCTCGCATT >UAMH11012_FJ418463_M7 TCCAGCATCACACTTTCCAGTATCTTAGAAGCCCGCTTCTCATTCCGTGCCGGTATAGCAGGCGGTGCCCTGACAACCTTCTTCGGCCTCCCTCTGTGTACAACTGAACCCTCCATATCGCTACTCAAACACTCGTCGTCGTCGTCGTCGTATTCCTGAAAATCCTCGTACCCAGAATCCTTCTCTTCCCTCAATCGACCTTCCTTCTGCTGATGTTGATGTTGAGAATGGAGAGAAGCCACG >UAMH11012_FJ418489_M8 ATTGCGGACTGTTGAGAGGAAGGCTTAAATAGAGTGGTACTAGGAAGTGTGGTGTGTGGTGTGTGGTGTGTGGTGTGTGGTGTGTGGTGTGTGGTGTGTGGTGTGTGGTGTGTGGTGTGTGTGTGGTGAAGAAAGGCAGAAGAAAAAGAGGACGAGAGAGATATTTTGAAAGGGAAATTGGTGGGAAGCTAATGTTGGGGTGGA >UAMH11012_FJ418525_M9 GGGGCATAAACCCTCACTTTCAATTCCACACACAAACACACACACACACACACACACACACACGTACGCACACAGAAAGTAAACCTTAAAGAAAGTAACTACTGTATACTCCCAAGTACACATAGTCGCTTAAGAACCTCTCTCAACCGGC >UAMH11012_DQ274671_RFLPprb ACATTTTGGCAATGGACCTCCCAGCGGGCCTGCAGGTGGAAGAGGCTTTGGCACACCTGGTGATAGAGATAGGAGGGGTATCGGAAGTGGACCGGGGAGTTTAGGACCGCCACCGCAGAGCTTGAATAAGAAGAGGACTTTTGATGGATTCCAGCAGAGCTCGAGCAAAGACGACAGAGGTCGGTTGGCTTTCGATGATTACGAGCGTGAGGAGAGACCACCGAAGCGCGCATTTAATACCTCGGATGATGAAGACGAGAGAGCTGGCAGTGGTGGTAGGGAGGAGGACAAGGCTGTTGCGAAGCCGACTCTGAGACTTGCTTCTCTTCCACCAGGCACGTCGCCTGCTGTTATTAAGGCTCTGCTTCCTAGCAATTTGACGGTTGATGCGGTCAGGATATTACCACCTTCTGGACCAGGCGTATACATGGAGAGGAAGAGCATGTCAGCAATCGTCACTTTGGCAAAGGACACAGCTGCGAACGATATCGATGCTGCTGTCAATGGGCTACAGAACAAGTATCTAGGGTATGGCTACTATCTCAATCTTCATCGACATCTGTCTTCAGCAGCAATATCGAACTCCGCATCTGTTCCAGCTCTTGGTACTTCAATGGCTTCACAGCCCTTCGGAGCCAAGCAAGTCGACATAGCA >UAMH11012_DQ274746_RFLPprb CCAACGCTTCGGCAGGACTGCCCATTGAATATTTCTCGCCAGAGTTGAAAGGAGTTTCCTCAGGGTCGAGATCGAGTGAAGATTGTACTGGAAGGCCGAGCGTTGTGCTGGGATCGTTGTTATTGCGCGAGGACCGTTGCTGTTTCATTCGAAGATAGACGTGAAAATGGATGTGAGAAATGGATGCAATCAAAGGTGCTGGTATGTAGGTAACGAAAGCCTTGAGTCCGGAAAGGCTAGCCTCGTCTGCACCAGTCCCATTCCCCACAATGAAGGTATTGTACTCGAAGAAGATGCGGATAGCTTCGCTGTGAATCGCTTTGTTGACGTACAGGATGCTCCCTCTGGCATCTGAGAGGAGAAGCTCCTTGAAAGATCTGCGTCGCGGAGTCGCAATCAGTATCGGTTCCTTGTGGACGAGGAGAAGTCGATAAATTTGACTCCGTATTTCTGGCGGCACAGCCATCAGCATTCCCCCT |
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