Publications Citing Strains in the UAMH Collection








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Displaying 1-44 of 44 results:
Title: Ophiostomatoid fungi associated with bark beetles infesting Pinus armandii, with characterizations of seven new species from China
Source: BioRxiv (2024)
Author(s): Chen M, Ran Y, Liu C, Liu K, Lin T, Yin M
UAMH strains(s): UAMH 6487; UAMH 10157; UAMH 11346

Title: Acetate metabolism in the fungal pathogen Cryptococcus neoformans
Source: PhD Thesis, Clemson University (2023)
Author(s): Ahmed O
UAMH strains(s): UAMH 1704; UAMH 5409; UAMH 5516; UAMH 7299; UAMH 7578; UAMH 9877; UAMH 10762; UAMH 11150; UAMH 11346

Title: Phylogenomics and diversification of Sordariomycetes
Source: Mycosphere 14(1): 414-451 (2023)
Author(s): Chen YP, Su PW, Hyde KW, Maharachchikumbura SSN
UAMH strains(s): UAMH 4594; UAMH 4595; UAMH 4885; UAMH 9393; UAMH 9402; UAMH 11346

Title: Comparative proteome profiling in the storage root of sweet potato during curing-mediated wound healing
Source: Journal of Plant Biotechnology 50: 1-10 (2023)
Author(s): Shin HY, Ji CY, Kim HS, Chung J, Choi SH, Kwak S, Kim Y, Lee JJ
UAMH strains(s): UAMH 11346

Title: Transcriptomic analysis of the fungus Graphilbum sp. in response to the pine wood nematode
Source: Journal of Basic Microbiology 63(6): 678-686 (2023)
Author(s): Zhou D, Liu Q, Su X, Zhou X
UAMH strains(s): UAMH 11346

Title: Phylogeny of Leptographium qinlingensis cytochrome P450 genes and transcription levels of six CYPs in response to different nutrition media or terpenoids
Source: Archives of Microbiology 204: 16 (2022)
Author(s): Dai L, Zheng J, Ye J, Chen H
UAMH strains(s): UAMH 11346

Title: Phylogeny of regulators of g-protein signaling genes in Leptographium qinlingensis and expression levels of three rgss in response to different terpenoids
Source: Microorganisms 10:1698 (2022)
Author(s): Gan T, An H, Tang M, Chen H
UAMH strains(s): UAMH 11346

Title: Met1-specific motifs conserved in OTUB subfamily of green plants enable rice OTUB1 to hydrolyse Met1 ubiquitin chains
Source: Nature Communications 13(1): 4672 (2022)
Author(s): Lu L, Zhai X, Li X, Wang S, Zhang L, Wang L, Jin X, Liang L, Deng Z, Li Z, Wang Y, Fu X, Hu H, Wang J, Mei Z, He Z, Wang F
UAMH strains(s): UAMH 11346

Title: Genome Analysis of the Broad Host Range Necrotroph Nalanthamala psidii Highlights Genes Associated With Virulence
Source: Frontiers In Plant Science 13: 811152 (2022)
Author(s): Severn-Ellis AA, Schoeman MH, Bayer PE, Hane JK, Rees DJG, Edwards D, Batley J
UAMH strains(s): UAMH 11346

Title: Distribution of methionine sulfoxide reductases in fungi and conservation of the free-methionine-R-sulfoxide reductase in multicellular eukaryotes
Source: Free Radical Biology & Medicine 169: 187-215 (2021)
Author(s): Hage H, Rosso MN, Tarrago L
UAMH strains(s): UAMH 1704; UAMH 7357; UAMH 10762; UAMH 11346

Title: Activity based Deubiquitinase profiling reveals OTUB1 from oryza sativa hydrolyzes linear ubiquitin chains by bi-modal activation
Source: Preprint (2021)
Author(s): Lu L, Wang J, Mei Z, Wang F
UAMH strains(s): UAMH 11346

Title: The mitochondrial genome of Ophiostoma himal-ulmi and comparison with other Dutch elm disease causing fungi.
Source: Canadian Journal of Microbiology 67: 584-598 (2021)
Author(s): Wai A, Hausner G
UAMH strains(s): UAMH 11346

Title: Method of treating a fabric
Source: US Patent App. 17/005,499 (2020)
Author(s): Lant NJ, Wood RL, Gummel JRM
UAMH strains(s): UAMH 11346

Title: The fungi and bacteria associated with three tree-killing beetles: from new species to complex communities
Source: Ecological Entomology 45: 1134-1145 (2020)
Author(s): Six DL, Elser JJ
UAMH strains(s): UAMH 4917; UAMH 9721; UAMH 10639; UAMH 11346; UAMH 11701

Title: Genomic and transcriptomic insights into Raffaelea lauricola pathogenesis
Source: BMC Genomics 21: 570 (2020)
Author(s): Zhang Y, Zhang J, Vanderpool D, Smith JA, Rollins JA
UAMH strains(s): UAMH 11346

Title: Genomic comparisons of the laurel wilt pathogen, Raffaelea lauricola, and related tree pathogens highlight an arsenal of pathogenicity related genes
Source: Fungal Genetics and Biology 125: 84-92 (2019)
Author(s): Caballero JRI, Jeon J, Lee YH, Fraedrich S, Klopfensteind NB, Kime MS, Stewart JE
UAMH strains(s): UAMH 11346

Title: Accessing the biocatalytic potential for C HActivation by targeted genome mining and screening
Source: ChemCatChem 11(23): 5766-5777 (2019)
Author(s): Schmitz LM, Schäper J, Rosenthal K, Lütz S
UAMH strains(s): UAMH 1704; UAMH 10762; UAMH 11346

Title: Cleaning compositions having an enzyme system
Source: US Patent 20180355287A1 (2018)
Author(s): Lant NJ, Vasquez Valdivieso MG
UAMH strains(s): UAMH 11346

Title: Cleaning compositions including enzymes
Source: US Patent 20180155802 (2018)
Author(s): Lant, NJ;
UAMH strains(s): UAMH 11346

Title: Structural and dynamic characterization of the Golgi Reassembly and Stacking Protein (GRASP) in solution
Source: PhD Thesis, Universidad de Sao Paulo (2018)
Author(s): Mendes LFS
UAMH strains(s): UAMH 11346

Title: A plant pathology perspective of fungal genome sequencing
Source: IMA Fungus 8: 1-45 (2017)
Author(s): Aylward J, Steenkamp ET, Dreyer LL, Roets F, Wingfield BD, Wingfield MJ
UAMH strains(s): UAMH 139; UAMH 1704; UAMH 3008; UAMH 3544; UAMH 3576; UAMH 5669; UAMH 7357; UAMH 10762; UAMH 11346

Title: Cleaning compositions including nuclease enzyme and amines
Source: US Patent 20170355930 (2017)
Author(s): Lant, Neil Joseph;
UAMH strains(s): UAMH 11346

Title: Cleaning compositions including nuclease enzyme and malodor reduction materials
Source: US Patent 20170355933 (2017)
Author(s): Lant, Neil Joseph;
UAMH strains(s): UAMH 11346

Title: Cleaning compositions including nuclease enzyme and tannins
Source: US Patent 20170355932 (2017)
Author(s): Lant, Neil Joseph; Bianchetti, Giulia Ottavia; Crestini, Claudia;
UAMH strains(s): UAMH 11346

Title: Genome-Wide Analysis of Secondary Metabolite Gene Clusters in Ophiostoma ulmi and Ophiostoma novo-ulmi Reveals a Fujikurin-Like Gene Cluster with a Putative Role in Infection
Source: Frontiers in Microbiology 8: 1063 (2017)
Author(s): Sbaraini N, Andreis FC, Thompson CE, Guedes RLM, Junges Â, Campos T, Staats CC, Vainstein MH, Ribeiro de Vasconcelos AT, Schrank A
UAMH strains(s): UAMH 11346

Title: Phylogenetic profiling identifies glucosyl-phosphoryl dolichol scramblase candidates
Source: bioRxiv: 209106 (2017)
Author(s): Skrabanek LA, Menon AK
UAMH strains(s): UAMH 10762; UAMH 11346

Title: Effect of Yarrowia lipolytica on postharvest decay of grapes caused by Talaromyces rugulosus and the protein expression profile of T. rugulosus
Source: Postharvest Biology and Technology 126: 15-22 (2017)
Author(s): Yang Q, Wang H, Zhang H, Zhang X, Apaliya MT, Zheng X, Mahunu GK
UAMH strains(s): UAMH 11346

Title: Genome-wide analysis of parasitic fitness traits in a non-model tree pathogen
Source: Canadian Journal of Plant Pathology 38: 153-163 (2016)
Author(s): Bernier L
UAMH strains(s): UAMH 11346

Title: Synthesis of olefinic alcohols via enzymatic terminal hydroxylation
Source: US Patent 20,160,108,436 (2016)
Author(s): Coelho P, Chen MMY, Meinhold P, Cho CM, Bui V
UAMH strains(s): UAMH 1704; UAMH 7654; UAMH 10762; UAMH 11150; UAMH 11346

Title: Acido-thermotolerant fungi from Boiling Springs Lake, LVNP: Potential for lignocellulosic biofuels
Source: American Mineralogist 101: 2484-2497 (2016)
Author(s): Ervin B, Wolfe G
UAMH strains(s): UAMH 11346

Title: UV-und Transposon-vermittelte Mutagenese mariner und terrestrischer Ascomyceten
Source: Dissertation: Mathematisch-Naturwissenschaftliche Fakultt (2016)
Author(s): L Paun
UAMH strains(s): UAMH 11346

Title: A genomic comparison of putative pathogenicity-related gene families in five members of the Ophiostomatales with different lifestyles
Source: Fungal Biology 121: 234-252 (2016)
Author(s): Lah L, Löber U, Hsiang T, Hartmann S
UAMH strains(s): UAMH 11346

Title: New structural insights into Golgi Reassembly and Stacking Protein (GRASP) in solution
Source: Scientific Reports 6: 29976 (Supplemental Information) (2016)
Author(s): SC Paulo
UAMH strains(s): UAMH 11346

Title: The bark-beetle-associated fungus, Endoconidiophora polonica, utilizes the phenolic defense compounds of its host as a carbon source
Source: Plant Physiology 171: 914-931 (2016)
Author(s): Wadke N, Kandasamy D, Vogel H, Lah L, Wingfield BD, Paetz C, Wright LP, Gershenzon J, Hammerbacher A
UAMH strains(s): UAMH 11346

Title: Biochemical and molecular characterization of a new glycoside hydrolase family 17 from Sclerotinia sclerotiorum.
Source: Molecular Biotechnology 57: 993-1002 (2015)
Author(s): Chahed H, Ezzine A, Mlouka MAB, Rihouey C, Hardouin J, Jouenne T, Marzouki MN
UAMH strains(s): UAMH 10762; UAMH 11346

Title: Functional annotation of the Ophiostoma novo-ulmi genome: insights into the phytopathogenicity of the fungal agent of Dutch elm disease
Source: Genome Biology and Evolution 7(2): 410-430 (2015)
Author(s): Comeau AM, Dufour J, Bouvet GF, Jacobi V, Nigg M, Henrissat B, Laroche J, Levesque RC, Bernier L
UAMH strains(s): UAMH 11346

Title: CYP51F1 Gene of Leptographium qinlingensis: sequence characteristic, phylogeny and transcript levels
Source: International Journal of Molecular Sciences 16(6): 12014-12034 (2015)
Author(s): Dai L, Li Z, Yu J, Ma M, Zhang R, Chen H, Pham T
UAMH strains(s): UAMH 11346

Title: Identification of South African fungi with high protein secreting capabilities
Source: Master Thesis, University of Pretoria (2015)
Author(s): Kabwe MH
UAMH strains(s): UAMH 11346

Title: Saprophytic and pathogenic fungi in the Ceratocystidaceae differ in their ability to metabolize plant-derived sucrose
Source: BMC Evolutionary Biology 15(1): article 273 (2015)
Author(s): Van der Nest MA, Steenkamp ET, McTaggart AR, Trollip C, Godlonton T, Sauerman E, Roodt D, Naidoo K, Coetzee MPA, Wilken PM, Wingfield MJ, Wingfield BD
UAMH strains(s): UAMH 11346

Title: Ascorbic acid enhances oxidative stress tolerance and biological control efficacy of Pichia caribbica against postharvest blue mold decay of apples
Source: Journal of Agricultural and Food Chemistry 62(30): 7612-7621 (2014)
Author(s): Li C, Zhang H, Yang Q, Komla MG, Zhang X, Zhu S
UAMH strains(s): UAMH 7667; UAMH 10405; UAMH 11346

Title: Gene discovery for enzymes involved in limonene modification or utilization by the mountain pine beetle-associated pathogen Grosmannia clavigera
Source: Applied and Environmental Microbiology 80(15): 4566-4576 (2014)
Author(s): Wang Y, Lim L, Madilao L, Lah L, Bohlmann J, Breuil C
UAMH strains(s): UAMH 1135; UAMH 1363; UAMH 4876; UAMH 10945; UAMH 11150; UAMH 11154; UAMH 11346; UAMH 11351; UAMH 11672; UAMH 11802; UAMH 11803; UAMH 11804; UAMH 11805; UAMH 11806; UAMH 11807

Title: ABC terpenoid transporters and methods of using the same
Source: US Patent Application 13/694,985 (2013)
Author(s): Breuil C, Bohlmann J, Wang Y, Diguistini S, Haridas S
UAMH strains(s): UAMH 11150; UAMH 11346

Title: The genome and transcriptome of the pine saprophyte Ophiostoma piceae, and a comparison with the bark beetle-associated pine pathogen Grosmannia
Source: BMC Genomics 14: 373 (2013)
Author(s): Haridas S, Wang Y, Lim L, Massoumi Alamouti S, Jackman S, Docking R, Robertson G, Birol I, Bohlmann J, Breuil C
UAMH strains(s): UAMH 11150; UAMH 11346; UAMH 11672

Title: Identification and molecular evolutionary analysis of fungal effector proteins
Source: Molecular Biology and Evolution 29: 3371-3384 (2012)
Author(s): Stergiopoulos I, Kourmpetis YA, Slot JC, Bakker FT, De Wit PJ, Rokas A
UAMH strains(s): UAMH 11346

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